How To Install r-bioc-rhdf5 on Ubuntu 22.04
Introduction
In this tutorial we learn how to install r-bioc-rhdf5
on Ubuntu 22.04.
What is r-bioc-rhdf5
r-bioc-rhdf5 is:
This package provides an interface between HDF5 and R. HDF5’s main features are the ability to store and access very large and/or complex datasets and a wide variety of metadata on mass storage (disk) through a completely portable file format. The rhdf5 package is thus suited for the exchange of large and/or complex datasets between R and other software package, and for letting R applications work on datasets that are larger than the available RAM.
There are three methods to install r-bioc-rhdf5
on Ubuntu 22.04. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-rhdf5 Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install r-bioc-rhdf5
using apt-get
by running the following command:
sudo apt-get -y install r-bioc-rhdf5
Install r-bioc-rhdf5 Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install r-bioc-rhdf5
using apt
by running the following command:
sudo apt -y install r-bioc-rhdf5
Install r-bioc-rhdf5 Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install r-bioc-rhdf5
using aptitude
by running the following command:
sudo aptitude -y install r-bioc-rhdf5
How To Uninstall r-bioc-rhdf5 on Ubuntu 22.04
To uninstall only the r-bioc-rhdf5
package we can use the following command:
sudo apt-get remove r-bioc-rhdf5
Uninstall r-bioc-rhdf5 And Its Dependencies
To uninstall r-bioc-rhdf5
and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:
sudo apt-get -y autoremove r-bioc-rhdf5
Remove r-bioc-rhdf5 Configurations and Data
To remove r-bioc-rhdf5
configuration and data from Ubuntu 22.04 we can use the following command:
sudo apt-get -y purge r-bioc-rhdf5
Remove r-bioc-rhdf5 configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-rhdf5
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-rhdf5
References
Summary
In this tutorial we learn how to install r-bioc-rhdf5
package on Ubuntu 22.04 using different package management tools: apt
, apt-get
and aptitude
.