How To Install r-bioc-pcamethods on Kali Linux

In this tutorial we learn how to install r-bioc-pcamethods on Kali Linux. r-bioc-pcamethods is BioConductor collection of PCA methods

Introduction

In this tutorial we learn how to install r-bioc-pcamethods on Kali Linux.

What is r-bioc-pcamethods

r-bioc-pcamethods is:

Provides Bayesian PCA, Probabilistic PCA, Nipals PCA, Inverse Non-Linear PCA and the conventional SVD PCA. A cluster based method for missing value estimation is included for comparison. BPCA, PPCA and NipalsPCA may be used to perform PCA on incomplete data as well as for accurate missing value estimation. A set of methods for printing and plotting the results is also provided. All PCA methods make use of the same data structure (pcaRes) to provide a common interface to the PCA results. Initiated at the Max-Planck Institute for Molecular Plant Physiology, Golm, Germany.

There are three methods to install r-bioc-pcamethods on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install r-bioc-pcamethods Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install r-bioc-pcamethods using apt-get by running the following command:

sudo apt-get -y install r-bioc-pcamethods

Install r-bioc-pcamethods Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install r-bioc-pcamethods using apt by running the following command:

sudo apt -y install r-bioc-pcamethods

Install r-bioc-pcamethods Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install r-bioc-pcamethods using aptitude by running the following command:

sudo aptitude -y install r-bioc-pcamethods

How To Uninstall r-bioc-pcamethods on Kali Linux

To uninstall only the r-bioc-pcamethods package we can use the following command:

sudo apt-get remove r-bioc-pcamethods

Uninstall r-bioc-pcamethods And Its Dependencies

To uninstall r-bioc-pcamethods and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove r-bioc-pcamethods

Remove r-bioc-pcamethods Configurations and Data

To remove r-bioc-pcamethods configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge r-bioc-pcamethods

Remove r-bioc-pcamethods configuration, data, and all of its dependencies

We can use the following command to remove r-bioc-pcamethods configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge r-bioc-pcamethods

Dependencies

r-bioc-pcamethods have the following dependencies:

References

Summary

In this tutorial we learn how to install r-bioc-pcamethods package on Kali Linux using different package management tools: apt, apt-get and aptitude.