How To Install r-bioc-mutationalpatterns on Kali Linux

In this tutorial we learn how to install r-bioc-mutationalpatterns on Kali Linux. r-bioc-mutationalpatterns is GNU R comprehensive genome-wide analysis of mutational processes

Introduction

In this tutorial we learn how to install r-bioc-mutationalpatterns on Kali Linux.

What is r-bioc-mutationalpatterns

r-bioc-mutationalpatterns is:

This BioConductor package provides an extensive toolset for the characterization and visualization of a wide range of mutational patterns in base substitution catalogs.

There are three methods to install r-bioc-mutationalpatterns on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install r-bioc-mutationalpatterns Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install r-bioc-mutationalpatterns using apt-get by running the following command:

sudo apt-get -y install r-bioc-mutationalpatterns

Install r-bioc-mutationalpatterns Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install r-bioc-mutationalpatterns using apt by running the following command:

sudo apt -y install r-bioc-mutationalpatterns

Install r-bioc-mutationalpatterns Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install r-bioc-mutationalpatterns using aptitude by running the following command:

sudo aptitude -y install r-bioc-mutationalpatterns

How To Uninstall r-bioc-mutationalpatterns on Kali Linux

To uninstall only the r-bioc-mutationalpatterns package we can use the following command:

sudo apt-get remove r-bioc-mutationalpatterns

Uninstall r-bioc-mutationalpatterns And Its Dependencies

To uninstall r-bioc-mutationalpatterns and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove r-bioc-mutationalpatterns

Remove r-bioc-mutationalpatterns Configurations and Data

To remove r-bioc-mutationalpatterns configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge r-bioc-mutationalpatterns

Remove r-bioc-mutationalpatterns configuration, data, and all of its dependencies

We can use the following command to remove r-bioc-mutationalpatterns configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge r-bioc-mutationalpatterns

Dependencies

r-bioc-mutationalpatterns have the following dependencies:

References

Summary

In this tutorial we learn how to install r-bioc-mutationalpatterns package on Kali Linux using different package management tools: apt, apt-get and aptitude.