How To Install r-bioc-multiassayexperiment on Kali Linux
Introduction
In this tutorial we learn how to install r-bioc-multiassayexperiment on Kali Linux.
What is r-bioc-multiassayexperiment
r-bioc-multiassayexperiment is:
MultiAssayExperiment harmonizes data management of multiple assays performed on an overlapping set of specimens. It provides a familiar Bioconductor user experience by extending concepts from SummarizedExperiment, supporting an open-ended mix of standard data classes for individual assays, and allowing subsetting by genomic ranges or rownames.
There are three methods to install r-bioc-multiassayexperiment on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-multiassayexperiment Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get updateAfter updating apt database, We can install r-bioc-multiassayexperiment using apt-get by running the following command:
sudo apt-get -y install r-bioc-multiassayexperimentInstall r-bioc-multiassayexperiment Using apt
Update apt database with apt using the following command.
sudo apt updateAfter updating apt database, We can install r-bioc-multiassayexperiment using apt by running the following command:
sudo apt -y install r-bioc-multiassayexperimentInstall r-bioc-multiassayexperiment Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.
sudo aptitude updateAfter updating apt database, We can install r-bioc-multiassayexperiment using aptitude by running the following command:
sudo aptitude -y install r-bioc-multiassayexperimentHow To Uninstall r-bioc-multiassayexperiment on Kali Linux
To uninstall only the r-bioc-multiassayexperiment package we can use the following command:
sudo apt-get remove r-bioc-multiassayexperimentUninstall r-bioc-multiassayexperiment And Its Dependencies
To uninstall r-bioc-multiassayexperiment and its dependencies that are no longer needed by Kali Linux, we can use the command below:
sudo apt-get -y autoremove r-bioc-multiassayexperimentRemove r-bioc-multiassayexperiment Configurations and Data
To remove r-bioc-multiassayexperiment configuration and data from Kali Linux we can use the following command:
sudo apt-get -y purge r-bioc-multiassayexperimentRemove r-bioc-multiassayexperiment configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-multiassayexperiment configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-multiassayexperimentDependencies
r-bioc-multiassayexperiment have the following dependencies:
- r-base-core
- r-api-4.0
- r-api-bioc-3.12
- r-bioc-summarizedexperiment
- r-bioc-genomicranges
- r-bioc-biocgenerics
- r-bioc-s4vectors
- r-bioc-iranges
- r-bioc-biobase
- r-cran-tidyr
References
Summary
In this tutorial we learn how to install r-bioc-multiassayexperiment package on Kali Linux using different package management tools: apt, apt-get and aptitude.
