How To Install r-bioc-metagenomeseq on Kali Linux

In this tutorial we learn how to install r-bioc-metagenomeseq on Kali Linux. r-bioc-metagenomeseq is GNU R statistical analysis for sparse high-throughput sequencing

Introduction

In this tutorial we learn how to install r-bioc-metagenomeseq on Kali Linux.

What is r-bioc-metagenomeseq

r-bioc-metagenomeseq is:

MetagenomeSeq is designed to determine features (be it Operational Taxanomic Unit (OTU), species, etc.) that are differentially abundant between two or more groups of multiple samples. metagenomeSeq is designed to address the effects of both normalization and under-sampling of microbial communities on disease association detection and the testing of feature correlations.

There are three methods to install r-bioc-metagenomeseq on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install r-bioc-metagenomeseq Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install r-bioc-metagenomeseq using apt-get by running the following command:

sudo apt-get -y install r-bioc-metagenomeseq

Install r-bioc-metagenomeseq Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install r-bioc-metagenomeseq using apt by running the following command:

sudo apt -y install r-bioc-metagenomeseq

Install r-bioc-metagenomeseq Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install r-bioc-metagenomeseq using aptitude by running the following command:

sudo aptitude -y install r-bioc-metagenomeseq

How To Uninstall r-bioc-metagenomeseq on Kali Linux

To uninstall only the r-bioc-metagenomeseq package we can use the following command:

sudo apt-get remove r-bioc-metagenomeseq

Uninstall r-bioc-metagenomeseq And Its Dependencies

To uninstall r-bioc-metagenomeseq and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove r-bioc-metagenomeseq

Remove r-bioc-metagenomeseq Configurations and Data

To remove r-bioc-metagenomeseq configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge r-bioc-metagenomeseq

Remove r-bioc-metagenomeseq configuration, data, and all of its dependencies

We can use the following command to remove r-bioc-metagenomeseq configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge r-bioc-metagenomeseq

Dependencies

r-bioc-metagenomeseq have the following dependencies:

References

Summary

In this tutorial we learn how to install r-bioc-metagenomeseq package on Kali Linux using different package management tools: apt, apt-get and aptitude.