How To Install r-bioc-htsfilter on Kali Linux
Introduction
In this tutorial we learn how to install r-bioc-htsfilter
on Kali Linux.
What is r-bioc-htsfilter
r-bioc-htsfilter is:
This package implements a filtering procedure for replicated transcriptome sequencing data based on a global Jaccard similarity index in order to identify genes with low, constant levels of expression across one or more experimental conditions.
There are three methods to install r-bioc-htsfilter
on Kali Linux. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-htsfilter Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install r-bioc-htsfilter
using apt-get
by running the following command:
sudo apt-get -y install r-bioc-htsfilter
Install r-bioc-htsfilter Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install r-bioc-htsfilter
using apt
by running the following command:
sudo apt -y install r-bioc-htsfilter
Install r-bioc-htsfilter Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install r-bioc-htsfilter
using aptitude
by running the following command:
sudo aptitude -y install r-bioc-htsfilter
How To Uninstall r-bioc-htsfilter on Kali Linux
To uninstall only the r-bioc-htsfilter
package we can use the following command:
sudo apt-get remove r-bioc-htsfilter
Uninstall r-bioc-htsfilter And Its Dependencies
To uninstall r-bioc-htsfilter
and its dependencies that are no longer needed by Kali Linux, we can use the command below:
sudo apt-get -y autoremove r-bioc-htsfilter
Remove r-bioc-htsfilter Configurations and Data
To remove r-bioc-htsfilter
configuration and data from Kali Linux we can use the following command:
sudo apt-get -y purge r-bioc-htsfilter
Remove r-bioc-htsfilter configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-htsfilter
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-htsfilter
Dependencies
r-bioc-htsfilter have the following dependencies:
References
Summary
In this tutorial we learn how to install r-bioc-htsfilter
package on Kali Linux using different package management tools: apt
, apt-get
and aptitude
.