How To Install r-bioc-htsfilter on Debian 12
Introduction
In this tutorial we learn how to install r-bioc-htsfilter on Debian 12.
What is r-bioc-htsfilter
r-bioc-htsfilter is:
This package implements a filtering procedure for replicated transcriptome sequencing data based on a global Jaccard similarity index in order to identify genes with low, constant levels of expression across one or more experimental conditions.
There are three methods to install r-bioc-htsfilter on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-htsfilter Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install r-bioc-htsfilter using apt-get by running the following command:
sudo apt-get -y install r-bioc-htsfilter
Install r-bioc-htsfilter Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install r-bioc-htsfilter using apt by running the following command:
sudo apt -y install r-bioc-htsfilter
Install r-bioc-htsfilter Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install r-bioc-htsfilter using aptitude by running the following command:
sudo aptitude -y install r-bioc-htsfilter
How To Uninstall r-bioc-htsfilter on Debian 12
To uninstall only the r-bioc-htsfilter package we can use the following command:
sudo apt-get remove r-bioc-htsfilter
Uninstall r-bioc-htsfilter And Its Dependencies
To uninstall r-bioc-htsfilter and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove r-bioc-htsfilter
Remove r-bioc-htsfilter Configurations and Data
To remove r-bioc-htsfilter configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge r-bioc-htsfilter
Remove r-bioc-htsfilter configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-htsfilter configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-htsfilter
Dependencies
r-bioc-htsfilter have the following dependencies:
References
Summary
In this tutorial we learn how to install r-bioc-htsfilter package on Debian 12 using different package management tools: apt, apt-get and aptitude.
