How To Install r-bioc-hilbertvis on Kali Linux
Introduction
In this tutorial we learn how to install r-bioc-hilbertvis on Kali Linux.
What is r-bioc-hilbertvis
r-bioc-hilbertvis is:
This tool allows one to display very long data vectors in a space-efficient manner, by organising it along a 2D Hilbert curve. The user can then visually judge the large scale structure and distribution of features simultaenously with the rough shape and intensity of individual features.
In bioinformatics, a typical use case is ChIP-Chip and ChIP-Seq, or basically all the kinds of genomic data, that are conventionally displayed as quantitative track (“wiggle data”) in genome browsers such as those provided by Ensembl or UCSC.
There are three methods to install r-bioc-hilbertvis on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-hilbertvis Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get updateAfter updating apt database, We can install r-bioc-hilbertvis using apt-get by running the following command:
sudo apt-get -y install r-bioc-hilbertvisInstall r-bioc-hilbertvis Using apt
Update apt database with apt using the following command.
sudo apt updateAfter updating apt database, We can install r-bioc-hilbertvis using apt by running the following command:
sudo apt -y install r-bioc-hilbertvisInstall r-bioc-hilbertvis Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.
sudo aptitude updateAfter updating apt database, We can install r-bioc-hilbertvis using aptitude by running the following command:
sudo aptitude -y install r-bioc-hilbertvisHow To Uninstall r-bioc-hilbertvis on Kali Linux
To uninstall only the r-bioc-hilbertvis package we can use the following command:
sudo apt-get remove r-bioc-hilbertvisUninstall r-bioc-hilbertvis And Its Dependencies
To uninstall r-bioc-hilbertvis and its dependencies that are no longer needed by Kali Linux, we can use the command below:
sudo apt-get -y autoremove r-bioc-hilbertvisRemove r-bioc-hilbertvis Configurations and Data
To remove r-bioc-hilbertvis configuration and data from Kali Linux we can use the following command:
sudo apt-get -y purge r-bioc-hilbertvisRemove r-bioc-hilbertvis configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-hilbertvis configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-hilbertvisDependencies
r-bioc-hilbertvis have the following dependencies:
References
Summary
In this tutorial we learn how to install r-bioc-hilbertvis package on Kali Linux using different package management tools: apt, apt-get and aptitude.