How To Install r-bioc-geneplotter on Kali Linux
Introduction
In this tutorial we learn how to install r-bioc-geneplotter on Kali Linux.
What is r-bioc-geneplotter
r-bioc-geneplotter is:
geneplotter contains plotting functions for microarrays
There are three methods to install r-bioc-geneplotter on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-geneplotter Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get updateAfter updating apt database, We can install r-bioc-geneplotter using apt-get by running the following command:
sudo apt-get -y install r-bioc-geneplotterInstall r-bioc-geneplotter Using apt
Update apt database with apt using the following command.
sudo apt updateAfter updating apt database, We can install r-bioc-geneplotter using apt by running the following command:
sudo apt -y install r-bioc-geneplotterInstall r-bioc-geneplotter Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.
sudo aptitude updateAfter updating apt database, We can install r-bioc-geneplotter using aptitude by running the following command:
sudo aptitude -y install r-bioc-geneplotterHow To Uninstall r-bioc-geneplotter on Kali Linux
To uninstall only the r-bioc-geneplotter package we can use the following command:
sudo apt-get remove r-bioc-geneplotterUninstall r-bioc-geneplotter And Its Dependencies
To uninstall r-bioc-geneplotter and its dependencies that are no longer needed by Kali Linux, we can use the command below:
sudo apt-get -y autoremove r-bioc-geneplotterRemove r-bioc-geneplotter Configurations and Data
To remove r-bioc-geneplotter configuration and data from Kali Linux we can use the following command:
sudo apt-get -y purge r-bioc-geneplotterRemove r-bioc-geneplotter configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-geneplotter configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-geneplotterDependencies
r-bioc-geneplotter have the following dependencies:
- r-base-core
- r-api-4.0
- r-api-bioc-3.12
- r-bioc-biobase
- r-bioc-biocgenerics
- r-cran-lattice
- r-bioc-annotate
- r-bioc-annotationdbi
- r-cran-rcolorbrewer
References
Summary
In this tutorial we learn how to install r-bioc-geneplotter package on Kali Linux using different package management tools: apt, apt-get and aptitude.