How To Install r-bioc-genefilter on Kali Linux
Introduction
In this tutorial we learn how to install r-bioc-genefilter on Kali Linux.
What is r-bioc-genefilter
r-bioc-genefilter is:
This BioConductor module provides methods for filtering genes from microarray experiments. It contains some basic functions for filtering genes.
There are three methods to install r-bioc-genefilter on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-genefilter Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get updateAfter updating apt database, We can install r-bioc-genefilter using apt-get by running the following command:
sudo apt-get -y install r-bioc-genefilterInstall r-bioc-genefilter Using apt
Update apt database with apt using the following command.
sudo apt updateAfter updating apt database, We can install r-bioc-genefilter using apt by running the following command:
sudo apt -y install r-bioc-genefilterInstall r-bioc-genefilter Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.
sudo aptitude updateAfter updating apt database, We can install r-bioc-genefilter using aptitude by running the following command:
sudo aptitude -y install r-bioc-genefilterHow To Uninstall r-bioc-genefilter on Kali Linux
To uninstall only the r-bioc-genefilter package we can use the following command:
sudo apt-get remove r-bioc-genefilterUninstall r-bioc-genefilter And Its Dependencies
To uninstall r-bioc-genefilter and its dependencies that are no longer needed by Kali Linux, we can use the command below:
sudo apt-get -y autoremove r-bioc-genefilterRemove r-bioc-genefilter Configurations and Data
To remove r-bioc-genefilter configuration and data from Kali Linux we can use the following command:
sudo apt-get -y purge r-bioc-genefilterRemove r-bioc-genefilter configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-genefilter configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-genefilterDependencies
r-bioc-genefilter have the following dependencies:
- r-base-core
- r-api-4.0
- r-api-bioc-3.12
- r-bioc-biocgenerics
- r-bioc-annotationdbi
- r-bioc-annotate
- r-bioc-biobase
- r-cran-survival
- libc6
- libgcc-s1
- libstdc++6
References
Summary
In this tutorial we learn how to install r-bioc-genefilter package on Kali Linux using different package management tools: apt, apt-get and aptitude.