How To Install r-bioc-complexheatmap on Debian 12
Introduction
In this tutorial we learn how to install r-bioc-complexheatmap on Debian 12.
What is r-bioc-complexheatmap
r-bioc-complexheatmap is:
Complex heatmaps are efficient to visualize associations between different sources of data sets and reveal potential patterns. Here the ComplexHeatmap package provides a highly flexible way to arrange multiple heatmaps and supports various annotation graphics.
There are three methods to install r-bioc-complexheatmap on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-complexheatmap Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install r-bioc-complexheatmap using apt-get by running the following command:
sudo apt-get -y install r-bioc-complexheatmap
Install r-bioc-complexheatmap Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install r-bioc-complexheatmap using apt by running the following command:
sudo apt -y install r-bioc-complexheatmap
Install r-bioc-complexheatmap Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install r-bioc-complexheatmap using aptitude by running the following command:
sudo aptitude -y install r-bioc-complexheatmap
How To Uninstall r-bioc-complexheatmap on Debian 12
To uninstall only the r-bioc-complexheatmap package we can use the following command:
sudo apt-get remove r-bioc-complexheatmap
Uninstall r-bioc-complexheatmap And Its Dependencies
To uninstall r-bioc-complexheatmap and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove r-bioc-complexheatmap
Remove r-bioc-complexheatmap Configurations and Data
To remove r-bioc-complexheatmap configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge r-bioc-complexheatmap
Remove r-bioc-complexheatmap configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-complexheatmap configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-complexheatmap
Dependencies
r-bioc-complexheatmap have the following dependencies:
- r-base-core
- r-api-4.0
- r-api-bioc-3.16
- r-cran-circlize
- r-cran-getoptlong
- r-cran-colorspace
- r-cran-clue
- r-cran-rcolorbrewer
- r-cran-globaloptions
- r-cran-png
- r-cran-digest
- r-bioc-iranges
- r-cran-matrixstats
- r-cran-foreach
- r-cran-doparallel
- r-cran-codetools
References
Summary
In this tutorial we learn how to install r-bioc-complexheatmap package on Debian 12 using different package management tools: apt, apt-get and aptitude.
