How To Install r-bioc-cner on Kali Linux
Introduction
In this tutorial we learn how to install r-bioc-cner
on Kali Linux.
What is r-bioc-cner
r-bioc-cner is:
Large-scale identification and advanced visualization of sets of conserved noncoding elements.
There are three methods to install r-bioc-cner
on Kali Linux. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-cner Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install r-bioc-cner
using apt-get
by running the following command:
sudo apt-get -y install r-bioc-cner
Install r-bioc-cner Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install r-bioc-cner
using apt
by running the following command:
sudo apt -y install r-bioc-cner
Install r-bioc-cner Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install r-bioc-cner
using aptitude
by running the following command:
sudo aptitude -y install r-bioc-cner
How To Uninstall r-bioc-cner on Kali Linux
To uninstall only the r-bioc-cner
package we can use the following command:
sudo apt-get remove r-bioc-cner
Uninstall r-bioc-cner And Its Dependencies
To uninstall r-bioc-cner
and its dependencies that are no longer needed by Kali Linux, we can use the command below:
sudo apt-get -y autoremove r-bioc-cner
Remove r-bioc-cner Configurations and Data
To remove r-bioc-cner
configuration and data from Kali Linux we can use the following command:
sudo apt-get -y purge r-bioc-cner
Remove r-bioc-cner configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-cner
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-cner
Dependencies
r-bioc-cner have the following dependencies:
- r-base-core
- r-api-4.0
- r-api-bioc-3.12
- r-bioc-biostrings
- r-cran-dbi
- r-cran-rsqlite
- r-bioc-genomeinfodb
- r-bioc-genomicranges
- r-bioc-rtracklayer
- r-bioc-xvector
- r-bioc-genomicalignments
- r-bioc-s4vectors
- r-bioc-iranges
- r-cran-readr
- r-bioc-biocgenerics
- r-cran-reshape2
- r-cran-ggplot2
- r-cran-powerlaw
- r-bioc-annotate
- r-bioc-go.db
- r-cran-r.utils
- r-bioc-keggrest
- libc6
References
Summary
In this tutorial we learn how to install r-bioc-cner
package on Kali Linux using different package management tools: apt
, apt-get
and aptitude
.