How To Install r-bioc-bluster on Debian 12
Introduction
In this tutorial we learn how to install r-bioc-bluster
on Debian 12.
What is r-bioc-bluster
r-bioc-bluster is:
Wraps common clustering algorithms in an easily extended S4 framework. Backends are implemented for hierarchical, k-means and graph-based clustering. Several utilities are also provided to compare and evaluate clustering results.
There are three methods to install r-bioc-bluster
on Debian 12. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-bluster Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install r-bioc-bluster
using apt-get
by running the following command:
sudo apt-get -y install r-bioc-bluster
Install r-bioc-bluster Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install r-bioc-bluster
using apt
by running the following command:
sudo apt -y install r-bioc-bluster
Install r-bioc-bluster Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install r-bioc-bluster
using aptitude
by running the following command:
sudo aptitude -y install r-bioc-bluster
How To Uninstall r-bioc-bluster on Debian 12
To uninstall only the r-bioc-bluster
package we can use the following command:
sudo apt-get remove r-bioc-bluster
Uninstall r-bioc-bluster And Its Dependencies
To uninstall r-bioc-bluster
and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove r-bioc-bluster
Remove r-bioc-bluster Configurations and Data
To remove r-bioc-bluster
configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge r-bioc-bluster
Remove r-bioc-bluster configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-bluster
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-bluster
Dependencies
r-bioc-bluster have the following dependencies:
- r-base-core
- r-api-4.0
- r-api-bioc-3.16
- r-cran-cluster
- r-cran-matrix
- r-cran-rcpp
- r-cran-igraph
- r-bioc-s4vectors
- r-bioc-biocparallel
- r-bioc-biocneighbors
- libc6
- libgcc-s1
- libstdc++6
References
Summary
In this tutorial we learn how to install r-bioc-bluster
package on Debian 12 using different package management tools: apt
, apt-get
and aptitude
.