How To Install r-bioc-biostrings on Debian 11

In this tutorial we learn how to install r-bioc-biostrings on Debian 11. r-bioc-biostrings is GNU R string objects representing biological sequences

Introduction

In this tutorial we learn how to install r-bioc-biostrings on Debian 11.

What is `r-bioc-biostrings`

r-bioc-biostrings is:

Memory efficient string containers, string matching algorithms, and other utilities, for fast manipulation of large biological sequences or set of sequences.

There are three methods to install r-bioc-biostrings on Debian 11. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install r-bioc-biostrings Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install r-bioc-biostrings using apt-get by running the following command:

sudo apt-get -y install r-bioc-biostrings

Install r-bioc-biostrings Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install r-bioc-biostrings using apt by running the following command:

sudo apt -y install r-bioc-biostrings

Install r-bioc-biostrings Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install r-bioc-biostrings using aptitude by running the following command:

sudo aptitude -y install r-bioc-biostrings

How To Uninstall r-bioc-biostrings on Debian 11

To uninstall only the r-bioc-biostrings package we can use the following command:

sudo apt-get remove r-bioc-biostrings

Uninstall r-bioc-biostrings And Its Dependencies

To uninstall r-bioc-biostrings and its dependencies that are no longer needed by Debian 11, we can use the command below:

sudo apt-get -y autoremove r-bioc-biostrings

Remove r-bioc-biostrings Configurations and Data

To remove r-bioc-biostrings configuration and data from Debian 11 we can use the following command:

sudo apt-get -y purge r-bioc-biostrings

Remove r-bioc-biostrings configuration, data, and all of its dependencies

We can use the following command to remove r-bioc-biostrings configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge r-bioc-biostrings

Dependencies

r-bioc-biostrings have the following dependencies:

References

Summary

In this tutorial we learn how to install r-bioc-biostrings package on Debian 11 using different package management tools: apt, apt-get and aptitude.