How To Install r-bioc-biocsingular on Kali Linux
Introduction
In this tutorial we learn how to install r-bioc-biocsingular
on Kali Linux.
What is r-bioc-biocsingular
r-bioc-biocsingular is:
Implements exact and approximate methods for singular value decomposition and principal components analysis, in a framework that allows them to be easily switched within Bioconductor packages or workflows. Where possible, parallelization is achieved using the BiocParallel framework.
There are three methods to install r-bioc-biocsingular
on Kali Linux. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-biocsingular Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install r-bioc-biocsingular
using apt-get
by running the following command:
sudo apt-get -y install r-bioc-biocsingular
Install r-bioc-biocsingular Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install r-bioc-biocsingular
using apt
by running the following command:
sudo apt -y install r-bioc-biocsingular
Install r-bioc-biocsingular Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install r-bioc-biocsingular
using aptitude
by running the following command:
sudo aptitude -y install r-bioc-biocsingular
How To Uninstall r-bioc-biocsingular on Kali Linux
To uninstall only the r-bioc-biocsingular
package we can use the following command:
sudo apt-get remove r-bioc-biocsingular
Uninstall r-bioc-biocsingular And Its Dependencies
To uninstall r-bioc-biocsingular
and its dependencies that are no longer needed by Kali Linux, we can use the command below:
sudo apt-get -y autoremove r-bioc-biocsingular
Remove r-bioc-biocsingular Configurations and Data
To remove r-bioc-biocsingular
configuration and data from Kali Linux we can use the following command:
sudo apt-get -y purge r-bioc-biocsingular
Remove r-bioc-biocsingular configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-biocsingular
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-biocsingular
Dependencies
r-bioc-biocsingular have the following dependencies:
- r-base-core
- r-api-4.0
- r-api-bioc-3.12
- r-bioc-biocgenerics
- r-bioc-s4vectors
- r-cran-matrix
- r-bioc-delayedarray
- r-bioc-biocparallel
- r-cran-irlba
- r-cran-rsvd
- r-cran-rcpp
- r-bioc-beachmat
- libc6
- libgcc-s1
- libstdc++6
References
Summary
In this tutorial we learn how to install r-bioc-biocsingular
package on Kali Linux using different package management tools: apt
, apt-get
and aptitude
.