How To Install r-bioc-bioccheck on Kali Linux
Introduction
In this tutorial we learn how to install r-bioc-bioccheck on Kali Linux.
What is r-bioc-bioccheck
r-bioc-bioccheck is:
Executes Bioconductor-specific package checks.
There are three methods to install r-bioc-bioccheck on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-bioccheck Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get updateAfter updating apt database, We can install r-bioc-bioccheck using apt-get by running the following command:
sudo apt-get -y install r-bioc-bioccheckInstall r-bioc-bioccheck Using apt
Update apt database with apt using the following command.
sudo apt updateAfter updating apt database, We can install r-bioc-bioccheck using apt by running the following command:
sudo apt -y install r-bioc-bioccheckInstall r-bioc-bioccheck Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.
sudo aptitude updateAfter updating apt database, We can install r-bioc-bioccheck using aptitude by running the following command:
sudo aptitude -y install r-bioc-bioccheckHow To Uninstall r-bioc-bioccheck on Kali Linux
To uninstall only the r-bioc-bioccheck package we can use the following command:
sudo apt-get remove r-bioc-bioccheckUninstall r-bioc-bioccheck And Its Dependencies
To uninstall r-bioc-bioccheck and its dependencies that are no longer needed by Kali Linux, we can use the command below:
sudo apt-get -y autoremove r-bioc-bioccheckRemove r-bioc-bioccheck Configurations and Data
To remove r-bioc-bioccheck configuration and data from Kali Linux we can use the following command:
sudo apt-get -y purge r-bioc-bioccheckRemove r-bioc-bioccheck configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-bioccheck configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-bioccheckDependencies
r-bioc-bioccheck have the following dependencies:
- r-base-core
- r-api-4.0
- r-api-bioc-3.12
- r-bioc-biocviews
- r-cran-biocmanager
- r-cran-stringdist
- r-bioc-graph
- r-cran-httr
- r-cran-optparse
- r-cran-codetools
- r-cran-knitr
References
Summary
In this tutorial we learn how to install r-bioc-bioccheck package on Kali Linux using different package management tools: apt, apt-get and aptitude.