How To Install r-bioc-beachmat on Ubuntu 22.04
Introduction
In this tutorial we learn how to install r-bioc-beachmat
on Ubuntu 22.04.
What is r-bioc-beachmat
r-bioc-beachmat is:
Provides a consistent C++ class interface for reading from and writing data to a variety of commonly used matrix types. Ordinary matrices and several sparse/dense Matrix classes are directly supported, third-party S4 classes may be supported by external linkage, while all other matrices are handled by DelayedArray block processing.
There are three methods to install r-bioc-beachmat
on Ubuntu 22.04. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-beachmat Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install r-bioc-beachmat
using apt-get
by running the following command:
sudo apt-get -y install r-bioc-beachmat
Install r-bioc-beachmat Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install r-bioc-beachmat
using apt
by running the following command:
sudo apt -y install r-bioc-beachmat
Install r-bioc-beachmat Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install r-bioc-beachmat
using aptitude
by running the following command:
sudo aptitude -y install r-bioc-beachmat
How To Uninstall r-bioc-beachmat on Ubuntu 22.04
To uninstall only the r-bioc-beachmat
package we can use the following command:
sudo apt-get remove r-bioc-beachmat
Uninstall r-bioc-beachmat And Its Dependencies
To uninstall r-bioc-beachmat
and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:
sudo apt-get -y autoremove r-bioc-beachmat
Remove r-bioc-beachmat Configurations and Data
To remove r-bioc-beachmat
configuration and data from Ubuntu 22.04 we can use the following command:
sudo apt-get -y purge r-bioc-beachmat
Remove r-bioc-beachmat configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-beachmat
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-beachmat
References
Summary
In this tutorial we learn how to install r-bioc-beachmat
package on Ubuntu 22.04 using different package management tools: apt
, apt-get
and aptitude
.