How To Install r-bioc-beachmat on Kali Linux

In this tutorial we learn how to install r-bioc-beachmat on Kali Linux. r-bioc-beachmat is I/O for several formats storing matrix data

Introduction

In this tutorial we learn how to install r-bioc-beachmat on Kali Linux.

What is r-bioc-beachmat

r-bioc-beachmat is:

Provides a consistent C++ class interface for reading from and writing data to a variety of commonly used matrix types. Ordinary matrices and several sparse/dense Matrix classes are directly supported, third-party S4 classes may be supported by external linkage, while all other matrices are handled by DelayedArray block processing.

There are three methods to install r-bioc-beachmat on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install r-bioc-beachmat Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install r-bioc-beachmat using apt-get by running the following command:

sudo apt-get -y install r-bioc-beachmat

Install r-bioc-beachmat Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install r-bioc-beachmat using apt by running the following command:

sudo apt -y install r-bioc-beachmat

Install r-bioc-beachmat Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install r-bioc-beachmat using aptitude by running the following command:

sudo aptitude -y install r-bioc-beachmat

How To Uninstall r-bioc-beachmat on Kali Linux

To uninstall only the r-bioc-beachmat package we can use the following command:

sudo apt-get remove r-bioc-beachmat

Uninstall r-bioc-beachmat And Its Dependencies

To uninstall r-bioc-beachmat and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove r-bioc-beachmat

Remove r-bioc-beachmat Configurations and Data

To remove r-bioc-beachmat configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge r-bioc-beachmat

Remove r-bioc-beachmat configuration, data, and all of its dependencies

We can use the following command to remove r-bioc-beachmat configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge r-bioc-beachmat

Dependencies

r-bioc-beachmat have the following dependencies:

References

Summary

In this tutorial we learn how to install r-bioc-beachmat package on Kali Linux using different package management tools: apt, apt-get and aptitude.