How To Install r-bioc-arrayexpress on Debian 12
Introduction
In this tutorial we learn how to install r-bioc-arrayexpress on Debian 12.
What is r-bioc-arrayexpress
r-bioc-arrayexpress is:
Access to the ArrayExpress Microarray Database at EBI and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet
There are three methods to install r-bioc-arrayexpress on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install r-bioc-arrayexpress Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install r-bioc-arrayexpress using apt-get by running the following command:
sudo apt-get -y install r-bioc-arrayexpress
Install r-bioc-arrayexpress Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install r-bioc-arrayexpress using apt by running the following command:
sudo apt -y install r-bioc-arrayexpress
Install r-bioc-arrayexpress Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install r-bioc-arrayexpress using aptitude by running the following command:
sudo aptitude -y install r-bioc-arrayexpress
How To Uninstall r-bioc-arrayexpress on Debian 12
To uninstall only the r-bioc-arrayexpress package we can use the following command:
sudo apt-get remove r-bioc-arrayexpress
Uninstall r-bioc-arrayexpress And Its Dependencies
To uninstall r-bioc-arrayexpress and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove r-bioc-arrayexpress
Remove r-bioc-arrayexpress Configurations and Data
To remove r-bioc-arrayexpress configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge r-bioc-arrayexpress
Remove r-bioc-arrayexpress configuration, data, and all of its dependencies
We can use the following command to remove r-bioc-arrayexpress configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge r-bioc-arrayexpress
Dependencies
r-bioc-arrayexpress have the following dependencies:
References
Summary
In this tutorial we learn how to install r-bioc-arrayexpress package on Debian 12 using different package management tools: apt, apt-get and aptitude.
