How To Install r-bioc-affyio on Kali Linux

In this tutorial we learn how to install r-bioc-affyio on Kali Linux. r-bioc-affyio is BioConductor tools for parsing Affymetrix data files

Introduction

In this tutorial we learn how to install r-bioc-affyio on Kali Linux.

What is r-bioc-affyio

r-bioc-affyio is:

This BioConductor package provides routines for parsing Affymetrix data files based upon file format information. Primary focus is on accessing the CEL and CDF file formats.

There are three methods to install r-bioc-affyio on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install r-bioc-affyio Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install r-bioc-affyio using apt-get by running the following command:

sudo apt-get -y install r-bioc-affyio

Install r-bioc-affyio Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install r-bioc-affyio using apt by running the following command:

sudo apt -y install r-bioc-affyio

Install r-bioc-affyio Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install r-bioc-affyio using aptitude by running the following command:

sudo aptitude -y install r-bioc-affyio

How To Uninstall r-bioc-affyio on Kali Linux

To uninstall only the r-bioc-affyio package we can use the following command:

sudo apt-get remove r-bioc-affyio

Uninstall r-bioc-affyio And Its Dependencies

To uninstall r-bioc-affyio and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove r-bioc-affyio

Remove r-bioc-affyio Configurations and Data

To remove r-bioc-affyio configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge r-bioc-affyio

Remove r-bioc-affyio configuration, data, and all of its dependencies

We can use the following command to remove r-bioc-affyio configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge r-bioc-affyio

Dependencies

r-bioc-affyio have the following dependencies:

References

Summary

In this tutorial we learn how to install r-bioc-affyio package on Kali Linux using different package management tools: apt, apt-get and aptitude.