How To Install python3-skbio on Debian 12

Learn how to install python3-skbio on Debian 12 with this tutorial. python3-skbio is Python3 data structures, algorithms, educational resources for bioinformatic

Introduction

In this tutorial we learn how to install python3-skbio on Debian 12.

What is `python3-skbio`

python3-skbio is:

Scikit-bio is a Python package providing data structures, algorithms, and educational resources for bioinformatics.

This is the package for Python3

There are three methods to install python3-skbio on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install python3-skbio Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install python3-skbio using apt-get by running the following command:

sudo apt-get -y install python3-skbio

Install python3-skbio Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install python3-skbio using apt by running the following command:

sudo apt -y install python3-skbio

Install python3-skbio Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install python3-skbio using aptitude by running the following command:

sudo aptitude -y install python3-skbio

How To Uninstall python3-skbio on Debian 12

To uninstall only the python3-skbio package we can use the following command:

sudo apt-get remove python3-skbio

Uninstall python3-skbio And Its Dependencies

To uninstall python3-skbio and its dependencies that are no longer needed by Debian 12, we can use the command below:

sudo apt-get -y autoremove python3-skbio

Remove python3-skbio Configurations and Data

To remove python3-skbio configuration and data from Debian 12 we can use the following command:

sudo apt-get -y purge python3-skbio

Remove python3-skbio configuration, data, and all of its dependencies

We can use the following command to remove python3-skbio configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge python3-skbio

Dependencies

python3-skbio have the following dependencies:

References

Summary

In this tutorial we learn how to install python3-skbio package on Debian 12 using different package management tools: apt, apt-get and aptitude.