How To Install python3-prody on Debian 12
Introduction
In this tutorial we learn how to install python3-prody on Debian 12.
What is python3-prody
python3-prody is:
ProDy is a free and open-source Python package for protein structure, dynamics, and sequence analysis. It allows for comparative analysis and modeling of protein structural dynamics and sequence co-evolution. Fast and flexible ProDy API is for interactive usage as well as application development. ProDy also comes with several analysis applications and a graphical user interface for visual analysis.
There are three methods to install python3-prody on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install python3-prody Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install python3-prody using apt-get by running the following command:
sudo apt-get -y install python3-prody
Install python3-prody Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install python3-prody using apt by running the following command:
sudo apt -y install python3-prody
Install python3-prody Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install python3-prody using aptitude by running the following command:
sudo aptitude -y install python3-prody
How To Uninstall python3-prody on Debian 12
To uninstall only the python3-prody package we can use the following command:
sudo apt-get remove python3-prody
Uninstall python3-prody And Its Dependencies
To uninstall python3-prody and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove python3-prody
Remove python3-prody Configurations and Data
To remove python3-prody configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge python3-prody
Remove python3-prody configuration, data, and all of its dependencies
We can use the following command to remove python3-prody configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge python3-prody
Dependencies
python3-prody have the following dependencies:
References
Summary
In this tutorial we learn how to install python3-prody package on Debian 12 using different package management tools: apt, apt-get and aptitude.