How To Install python3-peptidebuilder on Debian 12
Introduction
In this tutorial we learn how to install python3-peptidebuilder on Debian 12.
What is python3-peptidebuilder
python3-peptidebuilder is:
PeptideBuilder is a simple Python library to generate model peptides. Typically on daisychains a few residues in e.g. biopython, and so does PeptideBuilder, but it does it right.
Parameters like the backbone formation can be specified ab initio, rotamers/energy minimisation is left to respective specialist tools.
There are three methods to install python3-peptidebuilder on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install python3-peptidebuilder Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install python3-peptidebuilder using apt-get by running the following command:
sudo apt-get -y install python3-peptidebuilder
Install python3-peptidebuilder Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install python3-peptidebuilder using apt by running the following command:
sudo apt -y install python3-peptidebuilder
Install python3-peptidebuilder Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install python3-peptidebuilder using aptitude by running the following command:
sudo aptitude -y install python3-peptidebuilder
How To Uninstall python3-peptidebuilder on Debian 12
To uninstall only the python3-peptidebuilder package we can use the following command:
sudo apt-get remove python3-peptidebuilder
Uninstall python3-peptidebuilder And Its Dependencies
To uninstall python3-peptidebuilder and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove python3-peptidebuilder
Remove python3-peptidebuilder Configurations and Data
To remove python3-peptidebuilder configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge python3-peptidebuilder
Remove python3-peptidebuilder configuration, data, and all of its dependencies
We can use the following command to remove python3-peptidebuilder configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge python3-peptidebuilder
Dependencies
python3-peptidebuilder have the following dependencies:
References
Summary
In this tutorial we learn how to install python3-peptidebuilder package on Debian 12 using different package management tools: apt, apt-get and aptitude.
