How To Install python3-pbcore on Ubuntu 22.04
Introduction
In this tutorial we learn how to install python3-pbcore
on Ubuntu 22.04.
What is python3-pbcore
python3-pbcore is:
The pbcore package provides Python modules for processing Pacific Biosciences data files and building PacBio bioinformatics applications. These modules include tools to read/write PacBio data formats, sample data files for testing and debugging, base classes, and utilities for building bioinformatics applications.
This package is part of the SMRTAnalysis suite.
This is the Python 3 module.
There are three methods to install python3-pbcore
on Ubuntu 22.04. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install python3-pbcore Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install python3-pbcore
using apt-get
by running the following command:
sudo apt-get -y install python3-pbcore
Install python3-pbcore Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install python3-pbcore
using apt
by running the following command:
sudo apt -y install python3-pbcore
Install python3-pbcore Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install python3-pbcore
using aptitude
by running the following command:
sudo aptitude -y install python3-pbcore
How To Uninstall python3-pbcore on Ubuntu 22.04
To uninstall only the python3-pbcore
package we can use the following command:
sudo apt-get remove python3-pbcore
Uninstall python3-pbcore And Its Dependencies
To uninstall python3-pbcore
and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:
sudo apt-get -y autoremove python3-pbcore
Remove python3-pbcore Configurations and Data
To remove python3-pbcore
configuration and data from Ubuntu 22.04 we can use the following command:
sudo apt-get -y purge python3-pbcore
Remove python3-pbcore configuration, data, and all of its dependencies
We can use the following command to remove python3-pbcore
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge python3-pbcore
References
Summary
In this tutorial we learn how to install python3-pbcore
package on Ubuntu 22.04 using different package management tools: apt
, apt-get
and aptitude
.