How To Install python3-kineticstools on Debian 12

Learn how to install python3-kineticstools on Debian 12 with this tutorial. python3-kineticstools is detection of DNA modifications (Python 3 library)

Introduction

In this tutorial we learn how to install python3-kineticstools on Debian 12.

What is python3-kineticstools

python3-kineticstools is:

Tools for detecting DNA modifications from single molecule, real-time (SMRT?) sequencing data. This tool implements the P_ModificationDetection module in SMRT? Portal, used by the RS_Modification_Detection and RS_Modifications_and_Motif_Detection protocol. Researchers interested in understanding or extending the modification detection algorithms can use these tools as a starting point.

This package is part of the SMRTAnalysis suite and contains the backend Python 3 library.

There are three methods to install python3-kineticstools on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install python3-kineticstools Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install python3-kineticstools using apt-get by running the following command:

sudo apt-get -y install python3-kineticstools

Install python3-kineticstools Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install python3-kineticstools using apt by running the following command:

sudo apt -y install python3-kineticstools

Install python3-kineticstools Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install python3-kineticstools using aptitude by running the following command:

sudo aptitude -y install python3-kineticstools

How To Uninstall python3-kineticstools on Debian 12

To uninstall only the python3-kineticstools package we can use the following command:

sudo apt-get remove python3-kineticstools

Uninstall python3-kineticstools And Its Dependencies

To uninstall python3-kineticstools and its dependencies that are no longer needed by Debian 12, we can use the command below:

sudo apt-get -y autoremove python3-kineticstools

Remove python3-kineticstools Configurations and Data

To remove python3-kineticstools configuration and data from Debian 12 we can use the following command:

sudo apt-get -y purge python3-kineticstools

Remove python3-kineticstools configuration, data, and all of its dependencies

We can use the following command to remove python3-kineticstools configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge python3-kineticstools

Dependencies

python3-kineticstools have the following dependencies:

References

Summary

In this tutorial we learn how to install python3-kineticstools package on Debian 12 using different package management tools: apt, apt-get and aptitude.