How To Install python3-intervaltree-bio on Debian 9

In this tutorial we learn how to install python3-intervaltree-bio on Debian 9. python3-intervaltree-bio is Interval tree convenience classes for genomic data – Python 3 library

Introduction

In this tutorial we learn how to install python3-intervaltree-bio on Debian 9.

What is python3-intervaltree-bio

python3-intervaltree-bio is:

Convenience classes for loading UCSC genomic annotation records into a set of interval tree data structures.

This package provides the Python 3 library.

There are three methods to install python3-intervaltree-bio on Debian 9. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install python3-intervaltree-bio Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install python3-intervaltree-bio using apt-get by running the following command:

sudo apt-get -y install python3-intervaltree-bio

Install python3-intervaltree-bio Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install python3-intervaltree-bio using apt by running the following command:

sudo apt -y install python3-intervaltree-bio

Install python3-intervaltree-bio Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install python3-intervaltree-bio using aptitude by running the following command:

sudo aptitude -y install python3-intervaltree-bio

How To Uninstall python3-intervaltree-bio on Debian 9

To uninstall only the python3-intervaltree-bio package we can use the following command:

sudo apt-get remove python3-intervaltree-bio

Uninstall python3-intervaltree-bio And Its Dependencies

To uninstall python3-intervaltree-bio and its dependencies that are no longer needed by Debian 9, we can use the command below:

sudo apt-get -y autoremove python3-intervaltree-bio

Remove python3-intervaltree-bio Configurations and Data

To remove python3-intervaltree-bio configuration and data from Debian 9 we can use the following command:

sudo apt-get -y purge python3-intervaltree-bio

Remove python3-intervaltree-bio configuration, data, and all of its dependencies

We can use the following command to remove python3-intervaltree-bio configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge python3-intervaltree-bio

Dependencies

python3-intervaltree-bio have the following dependencies:

References

Summary

In this tutorial we learn how to install python3-intervaltree-bio package on Debian 9 using different package management tools: apt, apt-get and aptitude.