How To Install python3-indigo on Kali Linux

In this tutorial we learn how to install python3-indigo on Kali Linux. python3-indigo is Organic Chemistry Toolkit (Python module)

Introduction

In this tutorial we learn how to install python3-indigo on Kali Linux.

What is python3-indigo

python3-indigo is:

Indigo is a C++ based organic chemistry and cheminformatics software environment. Features Include:

  • Molecule and reaction rendering including SVG support
  • Automatic layout for SMILES-represented molecules and reactions
  • Canonical (isomeric) SMILES computation
  • Exact matching, substructure matching, SMARTS matching
  • Matching of tautomers and resonance structures
  • Molecule fingerprinting, molecule similarity computation
  • Fast enumeration of SSSR rings, subtrees, and edge sugraphs
  • Molecular weight, molecular formula computation
  • R-Group deconvolution and scaffold detection
  • Computation of the exact maximum common substructure for an arbitrary amount of input structures
  • Combinatorial chemistry
  • Plugin support in the API

File formats Indigo support include MDL Mol, SDF, RDF, CML, SMILES and SMARTS.

This package contains the Python modules.

There are three methods to install python3-indigo on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install python3-indigo Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install python3-indigo using apt-get by running the following command:

sudo apt-get -y install python3-indigo

Install python3-indigo Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install python3-indigo using apt by running the following command:

sudo apt -y install python3-indigo

Install python3-indigo Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install python3-indigo using aptitude by running the following command:

sudo aptitude -y install python3-indigo

How To Uninstall python3-indigo on Kali Linux

To uninstall only the python3-indigo package we can use the following command:

sudo apt-get remove python3-indigo

Uninstall python3-indigo And Its Dependencies

To uninstall python3-indigo and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove python3-indigo

Remove python3-indigo Configurations and Data

To remove python3-indigo configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge python3-indigo

Remove python3-indigo configuration, data, and all of its dependencies

We can use the following command to remove python3-indigo configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge python3-indigo

Dependencies

python3-indigo have the following dependencies:

References

Summary

In this tutorial we learn how to install python3-indigo package on Kali Linux using different package management tools: apt, apt-get and aptitude.