How To Install python3-deeptools on Debian 11

In this tutorial we learn how to install python3-deeptools on Debian 11. python3-deeptools is platform for exploring biological deep-sequencing data

Introduction

In this tutorial we learn how to install python3-deeptools on Debian 11.

What is `python3-deeptools`

python3-deeptools is:

Aiming for compatibility with the Galaxy worklfow environment, but also independently contributing to a series of workflows in genomics, this package provides a series of tools to address common tasks for the processing of high-throughput DNA/RNA sequencing.

There are three methods to install python3-deeptools on Debian 11. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install python3-deeptools Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install python3-deeptools using apt-get by running the following command:

sudo apt-get -y install python3-deeptools

Install python3-deeptools Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install python3-deeptools using apt by running the following command:

sudo apt -y install python3-deeptools

Install python3-deeptools Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install python3-deeptools using aptitude by running the following command:

sudo aptitude -y install python3-deeptools

How To Uninstall python3-deeptools on Debian 11

To uninstall only the python3-deeptools package we can use the following command:

sudo apt-get remove python3-deeptools

Uninstall python3-deeptools And Its Dependencies

To uninstall python3-deeptools and its dependencies that are no longer needed by Debian 11, we can use the command below:

sudo apt-get -y autoremove python3-deeptools

Remove python3-deeptools Configurations and Data

To remove python3-deeptools configuration and data from Debian 11 we can use the following command:

sudo apt-get -y purge python3-deeptools

Remove python3-deeptools configuration, data, and all of its dependencies

We can use the following command to remove python3-deeptools configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge python3-deeptools

Dependencies

python3-deeptools have the following dependencies:

References

Summary

In this tutorial we learn how to install python3-deeptools package on Debian 11 using different package management tools: apt, apt-get and aptitude.