How To Install python3-biomaj3-user on Debian 12
Introduction
In this tutorial we learn how to install python3-biomaj3-user on Debian 12.
What is python3-biomaj3-user
python3-biomaj3-user is:
BioMAJ downloads remote data banks, checks their status and applies transformation workflows, with consistent state, to provide ready-to-use data for biologists and bioinformaticians. For example, it can transform original FASTA files into BLAST indexes. It is very flexible and its post-processing facilities can be extended very easily.
BioMAJ3 is a rewrite of BioMAJ v1.x, see online documentation for migration.
This package contains the library and microservice to manage users in BioMAJ3
There are three methods to install python3-biomaj3-user on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install python3-biomaj3-user Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install python3-biomaj3-user using apt-get by running the following command:
sudo apt-get -y install python3-biomaj3-user
Install python3-biomaj3-user Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install python3-biomaj3-user using apt by running the following command:
sudo apt -y install python3-biomaj3-user
Install python3-biomaj3-user Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install python3-biomaj3-user using aptitude by running the following command:
sudo aptitude -y install python3-biomaj3-user
How To Uninstall python3-biomaj3-user on Debian 12
To uninstall only the python3-biomaj3-user package we can use the following command:
sudo apt-get remove python3-biomaj3-user
Uninstall python3-biomaj3-user And Its Dependencies
To uninstall python3-biomaj3-user and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove python3-biomaj3-user
Remove python3-biomaj3-user Configurations and Data
To remove python3-biomaj3-user configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge python3-biomaj3-user
Remove python3-biomaj3-user configuration, data, and all of its dependencies
We can use the following command to remove python3-biomaj3-user configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge python3-biomaj3-user
Dependencies
python3-biomaj3-user have the following dependencies:
- python3-biomaj3-core
- python3-consul
- python3-flask
- python3-ldap3
- python3-pymongo
- python3-tabulate
- python3-yaml
- python3
References
Summary
In this tutorial we learn how to install python3-biomaj3-user package on Debian 12 using different package management tools: apt, apt-get and aptitude.
