How To Install python3-biomaj3-cli on Ubuntu 20.04
Introduction
In this tutorial we learn how to install python3-biomaj3-cli
on Ubuntu 20.04.
What is python3-biomaj3-cli
python3-biomaj3-cli is:
BioMAJ downloads remote data banks, checks their status and applies transformation workflows, with consistent state, to provide ready-to-use data for biologists and bioinformaticians. For example, it can transform original FASTA files into BLAST indexes. It is very flexible and its post-processing facilities can be extended very easily.
BioMAJ3 is a rewrite of BioMAJ v1.x, see online documentation for migration.
This package contains the client to execute BioMAJ3 or communicate with the BioMAJ daemon process (python3-biomaj3-daemon) in case of microservice config. Python-Egg-Name: biomaj-cli
There are three methods to install python3-biomaj3-cli
on Ubuntu 20.04. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install python3-biomaj3-cli Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install python3-biomaj3-cli
using apt-get
by running the following command:
sudo apt-get -y install python3-biomaj3-cli
Install python3-biomaj3-cli Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install python3-biomaj3-cli
using apt
by running the following command:
sudo apt -y install python3-biomaj3-cli
Install python3-biomaj3-cli Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install python3-biomaj3-cli
using aptitude
by running the following command:
sudo aptitude -y install python3-biomaj3-cli
How To Uninstall python3-biomaj3-cli on Ubuntu 20.04
To uninstall only the python3-biomaj3-cli
package we can use the following command:
sudo apt-get remove python3-biomaj3-cli
Uninstall python3-biomaj3-cli And Its Dependencies
To uninstall python3-biomaj3-cli
and its dependencies that are no longer needed by Ubuntu 20.04, we can use the command below:
sudo apt-get -y autoremove python3-biomaj3-cli
Remove python3-biomaj3-cli Configurations and Data
To remove python3-biomaj3-cli
configuration and data from Ubuntu 20.04 we can use the following command:
sudo apt-get -y purge python3-biomaj3-cli
Remove python3-biomaj3-cli configuration, data, and all of its dependencies
We can use the following command to remove python3-biomaj3-cli
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge python3-biomaj3-cli
References
Summary
In this tutorial we learn how to install python3-biomaj3-cli
package on Ubuntu 20.04 using different package management tools: apt
, apt-get
and aptitude
.