How To Install python3-bcbio-gff on Kali Linux
Introduction
In this tutorial we learn how to install python3-bcbio-gff on Kali Linux.
What is python3-bcbio-gff
python3-bcbio-gff is:
A Python library to read and write Generic Feature Format (GFF).
Generic Feature Format (GFF) is a biological sequence file format for representing features and annotations on sequences. It is a tab delimited format, making it accessible to biologists and editable in text editors and spreadsheet programs. It is also well defined and can be parsed via automated programs. GFF files are available from many of the large sequencing and annotation centers.
There are three methods to install python3-bcbio-gff on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install python3-bcbio-gff Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get updateAfter updating apt database, We can install python3-bcbio-gff using apt-get by running the following command:
sudo apt-get -y install python3-bcbio-gffInstall python3-bcbio-gff Using apt
Update apt database with apt using the following command.
sudo apt updateAfter updating apt database, We can install python3-bcbio-gff using apt by running the following command:
sudo apt -y install python3-bcbio-gffInstall python3-bcbio-gff Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.
sudo aptitude updateAfter updating apt database, We can install python3-bcbio-gff using aptitude by running the following command:
sudo aptitude -y install python3-bcbio-gffHow To Uninstall python3-bcbio-gff on Kali Linux
To uninstall only the python3-bcbio-gff package we can use the following command:
sudo apt-get remove python3-bcbio-gffUninstall python3-bcbio-gff And Its Dependencies
To uninstall python3-bcbio-gff and its dependencies that are no longer needed by Kali Linux, we can use the command below:
sudo apt-get -y autoremove python3-bcbio-gffRemove python3-bcbio-gff Configurations and Data
To remove python3-bcbio-gff configuration and data from Kali Linux we can use the following command:
sudo apt-get -y purge python3-bcbio-gffRemove python3-bcbio-gff configuration, data, and all of its dependencies
We can use the following command to remove python3-bcbio-gff configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge python3-bcbio-gffDependencies
python3-bcbio-gff have the following dependencies:
References
Summary
In this tutorial we learn how to install python3-bcbio-gff package on Kali Linux using different package management tools: apt, apt-get and aptitude.
