How To Install python3-anndata on Debian 11
Introduction
In this tutorial we learn how to install python3-anndata
on Debian 11.
What is python3-anndata
python3-anndata is:
AnnData provides a scalable way of keeping track of data together with learned annotations. It is used within Scanpy, for which it was initially developed. Both packages have been introduced in Genome Biology (2018).
There are three methods to install python3-anndata
on Debian 11. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install python3-anndata Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install python3-anndata
using apt-get
by running the following command:
sudo apt-get -y install python3-anndata
Install python3-anndata Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install python3-anndata
using apt
by running the following command:
sudo apt -y install python3-anndata
Install python3-anndata Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install python3-anndata
using aptitude
by running the following command:
sudo aptitude -y install python3-anndata
How To Uninstall python3-anndata on Debian 11
To uninstall only the python3-anndata
package we can use the following command:
sudo apt-get remove python3-anndata
Uninstall python3-anndata And Its Dependencies
To uninstall python3-anndata
and its dependencies that are no longer needed by Debian 11, we can use the command below:
sudo apt-get -y autoremove python3-anndata
Remove python3-anndata Configurations and Data
To remove python3-anndata
configuration and data from Debian 11 we can use the following command:
sudo apt-get -y purge python3-anndata
Remove python3-anndata configuration, data, and all of its dependencies
We can use the following command to remove python3-anndata
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge python3-anndata
Dependencies
python3-anndata have the following dependencies:
References
Summary
In this tutorial we learn how to install python3-anndata
package on Debian 11 using different package management tools: apt
, apt-get
and aptitude
.