How To Install python-mdanalysis-doc on Debian 12
Introduction
In this tutorial we learn how to install python-mdanalysis-doc on Debian 12.
What is python-mdanalysis-doc
python-mdanalysis-doc is:
MDAnalysis is a Python library for the analysis of computer simulations of many-body systems at the molecular scale, spanning use cases from interactions of drugs with proteins to novel materials. It is widely used in the scientific community and is written by scientists for scientists.
MDAnalysis allows one to read particle-based trajectories (including individual coordinate frames such as biomolecules in the PDB format) and access the atomic coordinates through NumPy arrays. This provides a flexible and relatively fast framework for complex analysis tasks. In addition, powerful atom selection commands are implemented. Trajectories can also be manipulated (for instance, fit to a reference structure) and written out.
It works with a wide range of popular simulation packages including Gromacs, Amber, NAMD, CHARMM, DL_Poly, HooMD, LAMMPS and many others ?? see the lists of supported trajectory formats and topology formats. MDAnalysis also includes widely used analysis algorithms in the MDAnalysis.analysis module.
The MDAnalysis project uses an open governance model and is fiscally sponsored by NumFOCUS.
This is the documentation package for MDAnalysis.
There are three methods to install python-mdanalysis-doc on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install python-mdanalysis-doc Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install python-mdanalysis-doc using apt-get by running the following command:
sudo apt-get -y install python-mdanalysis-doc
Install python-mdanalysis-doc Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install python-mdanalysis-doc using apt by running the following command:
sudo apt -y install python-mdanalysis-doc
Install python-mdanalysis-doc Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install python-mdanalysis-doc using aptitude by running the following command:
sudo aptitude -y install python-mdanalysis-doc
How To Uninstall python-mdanalysis-doc on Debian 12
To uninstall only the python-mdanalysis-doc package we can use the following command:
sudo apt-get remove python-mdanalysis-doc
Uninstall python-mdanalysis-doc And Its Dependencies
To uninstall python-mdanalysis-doc and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove python-mdanalysis-doc
Remove python-mdanalysis-doc Configurations and Data
To remove python-mdanalysis-doc configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge python-mdanalysis-doc
Remove python-mdanalysis-doc configuration, data, and all of its dependencies
We can use the following command to remove python-mdanalysis-doc configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge python-mdanalysis-doc
Dependencies
python-mdanalysis-doc have the following dependencies:
References
Summary
In this tutorial we learn how to install python-mdanalysis-doc package on Debian 12 using different package management tools: apt, apt-get and aptitude.
