How To Install python-intervaltree-bio on Ubuntu 18.04
Introduction
In this tutorial we learn how to install python-intervaltree-bio on Ubuntu 18.04.
What is python-intervaltree-bio
python-intervaltree-bio is:
Convenience classes for loading UCSC genomic annotation records into a set of interval tree data structures.
This package provides the Python 2 library.
There are three methods to install python-intervaltree-bio on Ubuntu 18.04. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install python-intervaltree-bio Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install python-intervaltree-bio using apt-get by running the following command:
sudo apt-get -y install python-intervaltree-bio
Install python-intervaltree-bio Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install python-intervaltree-bio using apt by running the following command:
sudo apt -y install python-intervaltree-bio
Install python-intervaltree-bio Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install python-intervaltree-bio using aptitude by running the following command:
sudo aptitude -y install python-intervaltree-bio
How To Uninstall python-intervaltree-bio on Ubuntu 18.04
To uninstall only the python-intervaltree-bio package we can use the following command:
sudo apt-get remove python-intervaltree-bio
Uninstall python-intervaltree-bio And Its Dependencies
To uninstall python-intervaltree-bio and its dependencies that are no longer needed by Ubuntu 18.04, we can use the command below:
sudo apt-get -y autoremove python-intervaltree-bio
Remove python-intervaltree-bio Configurations and Data
To remove python-intervaltree-bio configuration and data from Ubuntu 18.04 we can use the following command:
sudo apt-get -y purge python-intervaltree-bio
Remove python-intervaltree-bio configuration, data, and all of its dependencies
We can use the following command to remove python-intervaltree-bio configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge python-intervaltree-bio
References
Summary
In this tutorial we learn how to install python-intervaltree-bio package on Ubuntu 18.04 using different package management tools: apt, apt-get and aptitude.
