How To Install pybedtools-bin on Kali Linux

Introduction

In this tutorial we learn how to install pybedtools-bin on Kali Linux.

What is pybedtools-bin

pybedtools-bin is:

The BEDTools suite of programs is widely used for genomic interval manipulation or ??genome algebra??. pybedtools wraps and extends BEDTools and offers feature-level manipulations from within Python.

This package provides scripts that are executable with the Python 3 version of this package.

There are three methods to install pybedtools-bin on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install pybedtools-bin Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install pybedtools-bin using apt-get by running the following command:

sudo apt-get -y install pybedtools-bin

Install pybedtools-bin Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install pybedtools-bin using apt by running the following command:

sudo apt -y install pybedtools-bin

Install pybedtools-bin Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install pybedtools-bin using aptitude by running the following command:

sudo aptitude -y install pybedtools-bin

How To Uninstall pybedtools-bin on Kali Linux

To uninstall only the pybedtools-bin package we can use the following command:

sudo apt-get remove pybedtools-bin

Uninstall pybedtools-bin And Its Dependencies

To uninstall pybedtools-bin and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove pybedtools-bin

Remove pybedtools-bin Configurations and Data

To remove pybedtools-bin configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge pybedtools-bin

Remove pybedtools-bin configuration, data, and all of its dependencies

We can use the following command to remove pybedtools-bin configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge pybedtools-bin

Dependencies

pybedtools-bin have the following dependencies:

• python3

References

• pybedtools-bin website

Summary

In this tutorial we learn how to install pybedtools-bin package on Kali Linux using different package management tools: apt, apt-get and aptitude.