How To Install proftmb on Ubuntu 18.04
Introduction
In this tutorial we learn how to install proftmb on Ubuntu 18.04.
What is proftmb
proftmb is:
proftmb predicts transmembrane beta-barrel (TMB) proteins in Gram-negative bacteria.
For each query protein, proftmb provides both a Z-value indicating that the protein actually contains a membrane barrel, and a four-state per-residue labeling of upward- and downward-facing strands, periplasmic hairpins and extracellular loops.
There are three methods to install proftmb on Ubuntu 18.04. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install proftmb Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install proftmb using apt-get by running the following command:
sudo apt-get -y install proftmb
Install proftmb Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install proftmb using apt by running the following command:
sudo apt -y install proftmb
Install proftmb Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install proftmb using aptitude by running the following command:
sudo aptitude -y install proftmb
How To Uninstall proftmb on Ubuntu 18.04
To uninstall only the proftmb package we can use the following command:
sudo apt-get remove proftmb
Uninstall proftmb And Its Dependencies
To uninstall proftmb and its dependencies that are no longer needed by Ubuntu 18.04, we can use the command below:
sudo apt-get -y autoremove proftmb
Remove proftmb Configurations and Data
To remove proftmb configuration and data from Ubuntu 18.04 we can use the following command:
sudo apt-get -y purge proftmb
Remove proftmb configuration, data, and all of its dependencies
We can use the following command to remove proftmb configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge proftmb
References
Summary
In this tutorial we learn how to install proftmb package on Ubuntu 18.04 using different package management tools: apt, apt-get and aptitude.
