How To Install profnet-prof on Debian 9
Introduction
In this tutorial we learn how to install profnet-prof
on Debian 9.
What is profnet-prof
profnet-prof is:
Profnet is a component of the prediction methods that make up the Predict Protein service by the lab of Burkhard Rost. It provides the neural network component to a variety of predictors that perform protein feature prediction directly from sequence. This neural network implementation has to be compiled for every different network architecture.
This package contains the neural network architecture for profsec and profacc.
There are three methods to install profnet-prof
on Debian 9. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install profnet-prof Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install profnet-prof
using apt-get
by running the following command:
sudo apt-get -y install profnet-prof
Install profnet-prof Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install profnet-prof
using apt
by running the following command:
sudo apt -y install profnet-prof
Install profnet-prof Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install profnet-prof
using aptitude
by running the following command:
sudo aptitude -y install profnet-prof
How To Uninstall profnet-prof on Debian 9
To uninstall only the profnet-prof
package we can use the following command:
sudo apt-get remove profnet-prof
Uninstall profnet-prof And Its Dependencies
To uninstall profnet-prof
and its dependencies that are no longer needed by Debian 9, we can use the command below:
sudo apt-get -y autoremove profnet-prof
Remove profnet-prof Configurations and Data
To remove profnet-prof
configuration and data from Debian 9 we can use the following command:
sudo apt-get -y purge profnet-prof
Remove profnet-prof configuration, data, and all of its dependencies
We can use the following command to remove profnet-prof
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge profnet-prof
Dependencies
profnet-prof have the following dependencies:
References
Summary
In this tutorial we learn how to install profnet-prof
package on Debian 9 using different package management tools: apt
, apt-get
and aptitude
.