How To Install pizzly on Kali Linux

Introduction

In this tutorial we learn how to install pizzly on Kali Linux.

What is pizzly

pizzly is:

For the interpretation of the transcriptome (the abundance and sequence of RNA) of tomour cells one is particularly interested in transcripts that cannot be mapped to single genes but that are seen to be fused as parts from two genes. Likely eplanations are chromosomal translocations.

Pizzly can identify novel such peculiarities, building on interpretations on variable splicing by the tool kallisto. Both tools are elements of the bcbio workflow.

There are three methods to install pizzly on Kali Linux. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install pizzly Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install pizzly using apt-get by running the following command:

sudo apt-get -y install pizzly

Install pizzly Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install pizzly using apt by running the following command:

sudo apt -y install pizzly

Install pizzly Using aptitude

If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install pizzly using aptitude by running the following command:

sudo aptitude -y install pizzly

How To Uninstall pizzly on Kali Linux

To uninstall only the pizzly package we can use the following command:

sudo apt-get remove pizzly

Uninstall pizzly And Its Dependencies

To uninstall pizzly and its dependencies that are no longer needed by Kali Linux, we can use the command below:

sudo apt-get -y autoremove pizzly

Remove pizzly Configurations and Data

To remove pizzly configuration and data from Kali Linux we can use the following command:

sudo apt-get -y purge pizzly

Remove pizzly configuration, data, and all of its dependencies

We can use the following command to remove pizzly configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge pizzly

Dependencies

pizzly have the following dependencies:

• libc6
• libgcc-s1
• libstdc++6
• zlib1g

References

• pizzly website

Summary

In this tutorial we learn how to install pizzly package on Kali Linux using different package management tools: apt, apt-get and aptitude.