How To Install phylip on Kali Linux
Introduction
In this tutorial we learn how to install phylip
on Kali Linux.
What is phylip
phylip is:
The PHYLogeny Inference Package is a package of programs for inferring phylogenies (evolutionary trees) from sequences. Methods that are available in the package include parsimony, distance matrix, and likelihood methods, including bootstrapping and consensus trees. Data types that can be handled include molecular sequences, gene frequencies, restriction sites, distance matrices, and 0/1 discrete characters.
There are three methods to install phylip
on Kali Linux. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install phylip Using apt-get
Update apt database with apt-get
using the following command.
After updating apt database, We can install phylip
using apt-get
by running the following command:
Install phylip Using apt
Update apt database with apt
using the following command.
After updating apt database, We can install phylip
using apt
by running the following command:
Install phylip Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude
using the following command.
After updating apt database, We can install phylip
using aptitude
by running the following command:
How To Uninstall phylip on Kali Linux
To uninstall only the phylip
package we can use the following command:
Uninstall phylip And Its Dependencies
To uninstall phylip
and its dependencies that are no longer needed by Kali Linux, we can use the command below:
Remove phylip Configurations and Data
To remove phylip
configuration and data from Kali Linux we can use the following command:
Remove phylip configuration, data, and all of its dependencies
We can use the following command to remove phylip
configurations, data and all of its dependencies, we can use the following command:
Dependencies
phylip have the following dependencies:
References
Summary
In this tutorial we learn how to install phylip
package on Kali Linux using different package management tools: apt
, apt-get
and aptitude
.