How To Install nanook-examples on Debian 12
Introduction
In this tutorial we learn how to install nanook-examples on Debian 12.
What is nanook-examples
nanook-examples is:
NanoOK is a flexible, multi-reference software for pre- and post- alignment analysis of nanopore sequencing data, quality and error profiles.
NanoOK (pronounced na-nook) is a tool for extraction, alignment and analysis of Nanopore reads. NanoOK will extract reads as FASTA or FASTQ files, align them (with a choice of alignment tools), then generate a comprehensive multi-page PDF report containing yield, accuracy and quality analysis. Along the way, it generates plain text files which can be used for further analysis, as well as graphs suitable for inclusion in presentations and papers.
This package contains some example data.
There are three methods to install nanook-examples on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install nanook-examples Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install nanook-examples using apt-get by running the following command:
sudo apt-get -y install nanook-examples
Install nanook-examples Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install nanook-examples using apt by running the following command:
sudo apt -y install nanook-examples
Install nanook-examples Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install nanook-examples using aptitude by running the following command:
sudo aptitude -y install nanook-examples
How To Uninstall nanook-examples on Debian 12
To uninstall only the nanook-examples package we can use the following command:
sudo apt-get remove nanook-examples
Uninstall nanook-examples And Its Dependencies
To uninstall nanook-examples and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove nanook-examples
Remove nanook-examples Configurations and Data
To remove nanook-examples configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge nanook-examples
Remove nanook-examples configuration, data, and all of its dependencies
We can use the following command to remove nanook-examples configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge nanook-examples
Dependencies
nanook-examples have the following dependencies:
References
Summary
In this tutorial we learn how to install nanook-examples package on Debian 12 using different package management tools: apt, apt-get and aptitude.
