How To Install metastudent-data on Ubuntu 18.04
Introduction
In this tutorial we learn how to install metastudent-data on Ubuntu 18.04.
What is metastudent-data
metastudent-data is:
Often, only the sequence of a protein is known, but not its functions. Metastudent will try to predict missing functional annotations through homology searches (BLAST).
All predicted functions correspond to Gene Ontology (GO) terms from the Molecular Function Ontology (MFO) and the Biological Process Ontology (BPO) and are associated with a reliability score.
This package contains data files for metastudent.
There are three methods to install metastudent-data on Ubuntu 18.04. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install metastudent-data Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install metastudent-data using apt-get by running the following command:
sudo apt-get -y install metastudent-data
Install metastudent-data Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install metastudent-data using apt by running the following command:
sudo apt -y install metastudent-data
Install metastudent-data Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install metastudent-data using aptitude by running the following command:
sudo aptitude -y install metastudent-data
How To Uninstall metastudent-data on Ubuntu 18.04
To uninstall only the metastudent-data package we can use the following command:
sudo apt-get remove metastudent-data
Uninstall metastudent-data And Its Dependencies
To uninstall metastudent-data and its dependencies that are no longer needed by Ubuntu 18.04, we can use the command below:
sudo apt-get -y autoremove metastudent-data
Remove metastudent-data Configurations and Data
To remove metastudent-data configuration and data from Ubuntu 18.04 we can use the following command:
sudo apt-get -y purge metastudent-data
Remove metastudent-data configuration, data, and all of its dependencies
We can use the following command to remove metastudent-data configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge metastudent-data
References
Summary
In this tutorial we learn how to install metastudent-data package on Ubuntu 18.04 using different package management tools: apt, apt-get and aptitude.
