How To Install liboscar4-java on Debian 12

Learn how to install liboscar4-java on Debian 12 with this tutorial. liboscar4-java is automated annotation of chemistry in scientific articles

Introduction

In this tutorial we learn how to install liboscar4-java on Debian 12.

What is liboscar4-java

liboscar4-java is:

OSCAR (Open Source Chemistry Analysis Routines) is an open source extensible system for the automated annotation of chemistry in scientific articles. It can be used to identify chemical names, reaction names, ontology terms, enzymes and chemical prefixes and adjectives, and chemical data such as state, yield, IR, NMR and mass spectra and elemental analyses. In addition, where possible, any chemical names detected will be annotated with structures derived either by lookup, or name-to-structure parsing using OPSIN or with identifiers from the ChEBI (Chemical Entities of Biological Interest) ontology.

There are three methods to install liboscar4-java on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install liboscar4-java Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install liboscar4-java using apt-get by running the following command:

sudo apt-get -y install liboscar4-java

Install liboscar4-java Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install liboscar4-java using apt by running the following command:

sudo apt -y install liboscar4-java

Install liboscar4-java Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install liboscar4-java using aptitude by running the following command:

sudo aptitude -y install liboscar4-java

How To Uninstall liboscar4-java on Debian 12

To uninstall only the liboscar4-java package we can use the following command:

sudo apt-get remove liboscar4-java

Uninstall liboscar4-java And Its Dependencies

To uninstall liboscar4-java and its dependencies that are no longer needed by Debian 12, we can use the command below:

sudo apt-get -y autoremove liboscar4-java

Remove liboscar4-java Configurations and Data

To remove liboscar4-java configuration and data from Debian 12 we can use the following command:

sudo apt-get -y purge liboscar4-java

Remove liboscar4-java configuration, data, and all of its dependencies

We can use the following command to remove liboscar4-java configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge liboscar4-java

Dependencies

liboscar4-java have the following dependencies:

References

Summary

In this tutorial we learn how to install liboscar4-java package on Debian 12 using different package management tools: apt, apt-get and aptitude.