How To Install libngs-java on Kali Linux
Introduction
In this tutorial we learn how to install libngs-java
on Kali Linux.
What is libngs-java
libngs-java is:
NGS is a new, domain-specific API for accessing reads, alignments and pileups produced from Next Generation Sequencing. The API itself is independent from any particular back-end implementation, and supports use of multiple back-ends simultaneously. It also provides a library for building new back-end “engines”. The engine for accessing SRA data is contained within the sister repository ncbi-vdb.
The API is currently expressed in C++, Java and Python languages. The design makes it possible to maintain a high degree of similarity between the code in one language and code in another - especially between C++ and Java.
Java bindings.
There are three methods to install libngs-java
on Kali Linux. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install libngs-java Using apt-get
Update apt database with apt-get
using the following command.
After updating apt database, We can install libngs-java
using apt-get
by running the following command:
Install libngs-java Using apt
Update apt database with apt
using the following command.
After updating apt database, We can install libngs-java
using apt
by running the following command:
Install libngs-java Using aptitude
If you want to follow this method, you might need to install aptitude on Kali Linux first since aptitude is usually not installed by default on Kali Linux. Update apt database with aptitude
using the following command.
After updating apt database, We can install libngs-java
using aptitude
by running the following command:
How To Uninstall libngs-java on Kali Linux
To uninstall only the libngs-java
package we can use the following command:
Uninstall libngs-java And Its Dependencies
To uninstall libngs-java
and its dependencies that are no longer needed by Kali Linux, we can use the command below:
Remove libngs-java Configurations and Data
To remove libngs-java
configuration and data from Kali Linux we can use the following command:
Remove libngs-java configuration, data, and all of its dependencies
We can use the following command to remove libngs-java
configurations, data and all of its dependencies, we can use the following command:
Dependencies
libngs-java have the following dependencies:
References
Summary
In this tutorial we learn how to install libngs-java
package on Kali Linux using different package management tools: apt
, apt-get
and aptitude
.