How To Install libindigo0d on Ubuntu 18.04

In this tutorial we learn how to install libindigo0d on Ubuntu 18.04. libindigo0d is Organic Chemistry Toolkit

Introduction

In this tutorial we learn how to install libindigo0d on Ubuntu 18.04.

What is libindigo0d

libindigo0d is:

Indigo is a C++ based organic chemistry and cheminformatics software environment. Features Include:

  • Molecule and reaction rendering including SVG support
  • Automatic layout for SMILES-represented molecules and reactions
  • Canonical (isomeric) SMILES computation
  • Exact matching, substructure matching, SMARTS matching
  • Matching of tautomers and resonance structures
  • Molecule fingerprinting, molecule similarity computation
  • Fast enumeration of SSSR rings, subtrees, and edge sugraphs
  • Molecular weight, molecular formula computation
  • R-Group deconvolution and scaffold detection
  • Computation of the exact maximum common substructure for an arbitrary amount of input structures
  • Combinatorial chemistry * Plugin support in the API

File formats Indigo support include MDL Mol, SDF, RDF, CML, SMILES and SMARTS.

There are three methods to install libindigo0d on Ubuntu 18.04. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.

Install libindigo0d Using apt-get

Update apt database with apt-get using the following command.

sudo apt-get update

After updating apt database, We can install libindigo0d using apt-get by running the following command:

sudo apt-get -y install libindigo0d

Install libindigo0d Using apt

Update apt database with apt using the following command.

sudo apt update

After updating apt database, We can install libindigo0d using apt by running the following command:

sudo apt -y install libindigo0d

Install libindigo0d Using aptitude

If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude using the following command.

sudo aptitude update

After updating apt database, We can install libindigo0d using aptitude by running the following command:

sudo aptitude -y install libindigo0d

How To Uninstall libindigo0d on Ubuntu 18.04

To uninstall only the libindigo0d package we can use the following command:

sudo apt-get remove libindigo0d

Uninstall libindigo0d And Its Dependencies

To uninstall libindigo0d and its dependencies that are no longer needed by Ubuntu 18.04, we can use the command below:

sudo apt-get -y autoremove libindigo0d

Remove libindigo0d Configurations and Data

To remove libindigo0d configuration and data from Ubuntu 18.04 we can use the following command:

sudo apt-get -y purge libindigo0d

Remove libindigo0d configuration, data, and all of its dependencies

We can use the following command to remove libindigo0d configurations, data and all of its dependencies, we can use the following command:

sudo apt-get -y autoremove --purge libindigo0d

References

Summary

In this tutorial we learn how to install libindigo0d package on Ubuntu 18.04 using different package management tools: apt, apt-get and aptitude.