How To Install libindigo-java on Debian 11
Introduction
In this tutorial we learn how to install libindigo-java
on Debian 11.
What is libindigo-java
libindigo-java is:
Indigo is a C++ based organic chemistry and cheminformatics software environment. Features Include:
- Molecule and reaction rendering including SVG support
- Automatic layout for SMILES-represented molecules and reactions
- Canonical (isomeric) SMILES computation
- Exact matching, substructure matching, SMARTS matching
- Matching of tautomers and resonance structures
- Molecule fingerprinting, molecule similarity computation
- Fast enumeration of SSSR rings, subtrees, and edge sugraphs
- Molecular weight, molecular formula computation
- R-Group deconvolution and scaffold detection
- Computation of the exact maximum common substructure for an arbitrary amount of input structures
- Combinatorial chemistry
- Plugin support in the API
File formats Indigo support include MDL Mol, SDF, RDF, CML, SMILES and SMARTS.
This package contains the Java packages.
There are three methods to install libindigo-java
on Debian 11. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install libindigo-java Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install libindigo-java
using apt-get
by running the following command:
sudo apt-get -y install libindigo-java
Install libindigo-java Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install libindigo-java
using apt
by running the following command:
sudo apt -y install libindigo-java
Install libindigo-java Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install libindigo-java
using aptitude
by running the following command:
sudo aptitude -y install libindigo-java
How To Uninstall libindigo-java on Debian 11
To uninstall only the libindigo-java
package we can use the following command:
sudo apt-get remove libindigo-java
Uninstall libindigo-java And Its Dependencies
To uninstall libindigo-java
and its dependencies that are no longer needed by Debian 11, we can use the command below:
sudo apt-get -y autoremove libindigo-java
Remove libindigo-java Configurations and Data
To remove libindigo-java
configuration and data from Debian 11 we can use the following command:
sudo apt-get -y purge libindigo-java
Remove libindigo-java configuration, data, and all of its dependencies
We can use the following command to remove libindigo-java
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge libindigo-java
Dependencies
libindigo-java have the following dependencies:
References
Summary
In this tutorial we learn how to install libindigo-java
package on Debian 11 using different package management tools: apt
, apt-get
and aptitude
.