How To Install libgatbcore2 on Debian 10
Introduction
In this tutorial we learn how to install libgatbcore2 on Debian 10.
What is libgatbcore2
libgatbcore2 is:
The GATB-CORE project provides a set of highly efficient algorithms to analyse NGS data sets. These methods enable the analysis of data sets of any size on multi-core desktop computers, including very huge amount of reads data coming from any kind of organisms such as bacteria, plants, animals and even complex samples (e.g. metagenomes). Read more about GATB at https://gatb.inria.fr/. By itself GATB-CORE is not an NGS data analysis tool. However, it can be used to create such tools. There already exist a set of ready-to-use tools relying on GATB-CORE library: see https://gatb.inria.fr/software/
This package contains the dynamic library.
There are three methods to install libgatbcore2 on Debian 10. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install libgatbcore2 Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install libgatbcore2 using apt-get by running the following command:
sudo apt-get -y install libgatbcore2
Install libgatbcore2 Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install libgatbcore2 using apt by running the following command:
sudo apt -y install libgatbcore2
Install libgatbcore2 Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install libgatbcore2 using aptitude by running the following command:
sudo aptitude -y install libgatbcore2
How To Uninstall libgatbcore2 on Debian 10
To uninstall only the libgatbcore2 package we can use the following command:
sudo apt-get remove libgatbcore2
Uninstall libgatbcore2 And Its Dependencies
To uninstall libgatbcore2 and its dependencies that are no longer needed by Debian 10, we can use the command below:
sudo apt-get -y autoremove libgatbcore2
Remove libgatbcore2 Configurations and Data
To remove libgatbcore2 configuration and data from Debian 10 we can use the following command:
sudo apt-get -y purge libgatbcore2
Remove libgatbcore2 configuration, data, and all of its dependencies
We can use the following command to remove libgatbcore2 configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge libgatbcore2
Dependencies
libgatbcore2 have the following dependencies:
References
Summary
In this tutorial we learn how to install libgatbcore2 package on Debian 10 using different package management tools: apt, apt-get and aptitude.