How To Install lamarc on Debian 12
Introduction
In this tutorial we learn how to install lamarc on Debian 12.
What is lamarc
lamarc is:
LAMARC is a program which estimates population-genetic parameters such as population size, population growth rate, recombination rate, and migration rates. It approximates a summation over all possible genealogies that could explain the observed sample, which may be sequence, SNP, microsatellite, or electrophoretic data. LAMARC and its sister program Migrate are successor programs to the older programs Coalesce, Fluctuate, and Recombine, which are no longer being supported. The programs are memory-intensive but can run effectively on workstations.
There are three methods to install lamarc on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install lamarc Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install lamarc using apt-get by running the following command:
sudo apt-get -y install lamarc
Install lamarc Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install lamarc using apt by running the following command:
sudo apt -y install lamarc
Install lamarc Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install lamarc using aptitude by running the following command:
sudo aptitude -y install lamarc
How To Uninstall lamarc on Debian 12
To uninstall only the lamarc package we can use the following command:
sudo apt-get remove lamarc
Uninstall lamarc And Its Dependencies
To uninstall lamarc and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove lamarc
Remove lamarc Configurations and Data
To remove lamarc configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge lamarc
Remove lamarc configuration, data, and all of its dependencies
We can use the following command to remove lamarc configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge lamarc
Dependencies
lamarc have the following dependencies:
References
Summary
In this tutorial we learn how to install lamarc package on Debian 12 using different package management tools: apt, apt-get and aptitude.