How To Install kleborate-examples on Ubuntu 20.04
Introduction
In this tutorial we learn how to install kleborate-examples
on Ubuntu 20.04.
What is kleborate-examples
kleborate-examples is:
Kleborate is a tool to screen Klebsiella genome assemblies for:
- MLST sequence type
- species (e.g. K. pneumoniae, K. quasipneumoniae, K. variicola, etc.)
- ICEKp associated virulence loci: yersiniabactin (ybt), colibactin (clb)
- virulence plasmid associated loci: salmochelin (iro), aerobactin (iuc), hypermucoidy (rmpA, rmpA2)
- antimicrobial resistance genes, including quinolone resistance SNPs and colistin resistance truncations
- K (capsule) and O antigen (LPS) serotype prediction, via wzi alleles and Kaptive
This package provides example data end tests that are used in autopkgtest.
There are three methods to install kleborate-examples
on Ubuntu 20.04. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install kleborate-examples Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install kleborate-examples
using apt-get
by running the following command:
sudo apt-get -y install kleborate-examples
Install kleborate-examples Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install kleborate-examples
using apt
by running the following command:
sudo apt -y install kleborate-examples
Install kleborate-examples Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install kleborate-examples
using aptitude
by running the following command:
sudo aptitude -y install kleborate-examples
How To Uninstall kleborate-examples on Ubuntu 20.04
To uninstall only the kleborate-examples
package we can use the following command:
sudo apt-get remove kleborate-examples
Uninstall kleborate-examples And Its Dependencies
To uninstall kleborate-examples
and its dependencies that are no longer needed by Ubuntu 20.04, we can use the command below:
sudo apt-get -y autoremove kleborate-examples
Remove kleborate-examples Configurations and Data
To remove kleborate-examples
configuration and data from Ubuntu 20.04 we can use the following command:
sudo apt-get -y purge kleborate-examples
Remove kleborate-examples configuration, data, and all of its dependencies
We can use the following command to remove kleborate-examples
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge kleborate-examples
References
Summary
In this tutorial we learn how to install kleborate-examples
package on Ubuntu 20.04 using different package management tools: apt
, apt-get
and aptitude
.