How To Install gbrowse-data on Ubuntu 22.04
Introduction
In this tutorial we learn how to install gbrowse-data
on Ubuntu 22.04.
What is gbrowse-data
gbrowse-data is:
Generic Genome Browser is a simple but highly configurable web-based genome browser. It is a component of the Generic Model Organism Systems Database project (GMOD).
This package contains sample data to test the gbrowse tool with the Yeast genome.
There are three methods to install gbrowse-data
on Ubuntu 22.04. We can use apt-get
, apt
and aptitude
. In the following sections we will describe each method. You can choose one of them.
Install gbrowse-data Using apt-get
Update apt database with apt-get
using the following command.
sudo apt-get update
After updating apt database, We can install gbrowse-data
using apt-get
by running the following command:
sudo apt-get -y install gbrowse-data
Install gbrowse-data Using apt
Update apt database with apt
using the following command.
sudo apt update
After updating apt database, We can install gbrowse-data
using apt
by running the following command:
sudo apt -y install gbrowse-data
Install gbrowse-data Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Ubuntu. Update apt database with aptitude
using the following command.
sudo aptitude update
After updating apt database, We can install gbrowse-data
using aptitude
by running the following command:
sudo aptitude -y install gbrowse-data
How To Uninstall gbrowse-data on Ubuntu 22.04
To uninstall only the gbrowse-data
package we can use the following command:
sudo apt-get remove gbrowse-data
Uninstall gbrowse-data And Its Dependencies
To uninstall gbrowse-data
and its dependencies that are no longer needed by Ubuntu 22.04, we can use the command below:
sudo apt-get -y autoremove gbrowse-data
Remove gbrowse-data Configurations and Data
To remove gbrowse-data
configuration and data from Ubuntu 22.04 we can use the following command:
sudo apt-get -y purge gbrowse-data
Remove gbrowse-data configuration, data, and all of its dependencies
We can use the following command to remove gbrowse-data
configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge gbrowse-data
References
Summary
In this tutorial we learn how to install gbrowse-data
package on Ubuntu 22.04 using different package management tools: apt
, apt-get
and aptitude
.