How To Install gbrowse-data on Debian 12
Introduction
In this tutorial we learn how to install gbrowse-data on Debian 12.
What is gbrowse-data
gbrowse-data is:
Generic Genome Browser is a simple but highly configurable web-based genome browser. It is a component of the Generic Model Organism Systems Database project (GMOD).
This package contains sample data to test the gbrowse tool with the Yeast genome.
There are three methods to install gbrowse-data on Debian 12. We can use apt-get, apt and aptitude. In the following sections we will describe each method. You can choose one of them.
Install gbrowse-data Using apt-get
Update apt database with apt-get using the following command.
sudo apt-get update
After updating apt database, We can install gbrowse-data using apt-get by running the following command:
sudo apt-get -y install gbrowse-data
Install gbrowse-data Using apt
Update apt database with apt using the following command.
sudo apt update
After updating apt database, We can install gbrowse-data using apt by running the following command:
sudo apt -y install gbrowse-data
Install gbrowse-data Using aptitude
If you want to follow this method, you might need to install aptitude first since aptitude is usually not installed by default on Debian. Update apt database with aptitude using the following command.
sudo aptitude update
After updating apt database, We can install gbrowse-data using aptitude by running the following command:
sudo aptitude -y install gbrowse-data
How To Uninstall gbrowse-data on Debian 12
To uninstall only the gbrowse-data package we can use the following command:
sudo apt-get remove gbrowse-data
Uninstall gbrowse-data And Its Dependencies
To uninstall gbrowse-data and its dependencies that are no longer needed by Debian 12, we can use the command below:
sudo apt-get -y autoremove gbrowse-data
Remove gbrowse-data Configurations and Data
To remove gbrowse-data configuration and data from Debian 12 we can use the following command:
sudo apt-get -y purge gbrowse-data
Remove gbrowse-data configuration, data, and all of its dependencies
We can use the following command to remove gbrowse-data configurations, data and all of its dependencies, we can use the following command:
sudo apt-get -y autoremove --purge gbrowse-data
Dependencies
gbrowse-data have the following dependencies:
References
Summary
In this tutorial we learn how to install gbrowse-data package on Debian 12 using different package management tools: apt, apt-get and aptitude.
